17 docs tagged with "fasta"

Bactopia Tool: Amrfinderplus.

Rapid annotation of bacterial genomes and plasmids.

Search against nucleotide BLAST databases using nucleotide queries.

Search against protein BLAST databases using protein queries.

Search against protein BLAST databases using translated nucleotide queries.

Taxonomic classification of Bacillus cereus group isolates.

In silico prediction of Escherichia coli serotype.

emm-typing of Streptococcus pyogenes assemblies.

Serotype prediction of Haemophilus parasuis assemblies.

Sequence Based Typing (SBT) of Legionella pneumophila.

Serogroup typing prediction for Listeria monocytogenes.

Sequence variation analysis of mcr-1 genes (mobilized colistin resistance).

Comprehensive typing of Neisseria meningitidis.

In silico serogrouping of Pseudomonas aeruginosa isolates.

Serotype prediction of Streptococcus suis assemblies.

Search against translated nucleotide databases using protein queries.

Search against translated nucleotide databases using translated nucleotide queries.