14 docs tagged with "typing"

Rapid identification of Staphylococcus aureus agr locus type and agr operon variants.

Run all available MLST schemes for a species against an assembly

Sequence Based Typing (SBT) of Legionella pneumophila.

MinMER-assisted species-specific tool selection and execution.

Automatic Multi-Locus Sequence Type (MLST) calling from assembled contigs.

Reconstruction and annotation of plasmids from bacterial genome assemblies.

Multi-antigen sequence typing of Neisseria gonorrhoeae.

In silico serogrouping of Pseudomonas aeruginosa isolates.

Penicillin Binding Protein (PBP) typing for Streptococcus pneumoniae.

Bactopia Tool: Plasmidfinder.

Typing of SCCmec cassettes in Staphylococcus aureus assemblies.

Serovar prediction of Salmonella enterica from assemblies.

Comprehensive typing of Staphylococcus aureus genomes.

Detection of antimicrobial resistance and lineage typing of Mycobacterium tuberculosis.