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11 docs tagged with "blast"

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blast_blastn

Search a nucleotide database using a nucleotide query.

blast_blastp

Search a protein database using a protein query.

blast_blastx

Search a protein database using a translated nucleotide query.

blast_tblastn

Search a translated nucleotide database using a protein query.

blast_tblastx

Search a translated nucleotide database using a translated nucleotide query.

blastn

Search a nucleotide database using nucleotide query sequences.

blastp

Search protein sequences against protein database.

blastx

Translate nucleotide sequences and search protein database.

pasty

Predict O-antigen serogroup of Pseudomonas aeruginosa isolates.

tblastn

Search protein query sequences against nucleotide database.

tblastx

Translate nucleotide query sequences and search nucleotide database.