Skip to main content

7 docs tagged with "distance"

View all tags

mash_dist

Calculate genomic distances using MinHash sketches.

mashdist

Calculate Mash distances between sequences and a reference.

mashtree

Rapid alignment-free phylogenomic tree construction.

mashtree

Create phylogenetic trees using Mash distances.

merlindist

Identify species from assembly and read data using Mash distances.

snpdists

Create a SNP distance matrix from a multiple sequence alignment.

snpdists

Calculate pairwise SNP distances from sequence alignments.