clermontyping
Determine the phylogroup of Escherichia coli isolates.
4 docs tagged with "escherichia-coli"
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Predict phylogroups of Escherichia coli from genome assemblies.
ectyper
Predict *Escherichia coli* serotype (O and H antigens).
stecfinder
Identify and serotype Shiga toxin-producing E. coli (STEC) from assemblies.