abricate_run
Mass screening of contigs for antimicrobial and virulence genes.
Mass screening of contigs for antimicrobial and virulence genes.
Detect antimicrobial resistance and virulence genes.
Determine the agr locus type and operon variants in Staphylococcus aureus.
Identify antimicrobial resistance and virulence genes in gene or protein sequences.
Search a nucleotide database using a nucleotide query.
Search a protein database using a protein query.
Search a protein database using a translated nucleotide query.
Search a translated nucleotide database using a protein query.
Search a translated nucleotide database using a translated nucleotide query.
Search a nucleotide database using nucleotide query sequences.
Download assemblies and annotation files from NCBI's Assembly database.